#! /bin/tcsh -ef # # map_all_labels-lh # # # Copyright © 2021 The General Hospital Corporation (Boston, MA) "MGH" # # Terms and conditions for use, reproduction, distribution and contribution # are found in the 'FreeSurfer Software License Agreement' contained # in the file 'LICENSE' found in the FreeSurfer distribution, and here: # # https://surfer.nmr.mgh.harvard.edu/fswiki/FreeSurferSoftwareLicense # # Reporting: freesurfer@nmr.mgh.harvard.edu # # set ddir=$SUBJECTS_DIR/$1/label foreach hemi (lh) foreach label (avg_superior_temporal_sulcus avg_central_sulcus avg_calcarine_sulcus) mris_spherical_average -o $1 label ${hemi}-${label} $hemi sphere.reg average7 $ddir/${hemi}-${label} end end